Sobic.005G013400.1

Description : WRKY-type transcription factor

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.005G013400.1
Cluster	HCAA Clusters: Cluster_273

Target	Alias	Description	ECC score	Gene Family Method
A4A49_13674	No alias	putative wrky transcription factor 48	0.03	Orthogroups_2024-Update
At4g39410	No alias	WRKY13 [Source:UniProtKB/TrEMBL;Acc:A0A178UV80]	0.03	Orthogroups_2024-Update
At5g07100	No alias	Probable WRKY transcription factor 26...	0.03	Orthogroups_2024-Update
Bradi1g17660	No alias	WRKY DNA-binding protein 70	0.02	Orthogroups_2024-Update
Bradi2g11170	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Bradi2g22440	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
Brara.C02964.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.D02112.1	No alias	WRKY-type transcription factor	0.01	Orthogroups_2024-Update
Brara.J01462.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G038158	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G151763	No alias	WRKY DNA-binding protein 28	0.02	Orthogroups_2024-Update
Glyma.01G043300	No alias	WRKY DNA-binding protein 72	0.03	Orthogroups_2024-Update
Glyma.01G053800	No alias	WRKY DNA-binding protein 3	0.02	Orthogroups_2024-Update
Glyma.01G128100	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
Glyma.01G222300	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.01G224800	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Glyma.02G285900	No alias	WRKY DNA-binding protein 28	0.03	Orthogroups_2024-Update
Glyma.18G208800	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
HORVU1Hr1G070250.2	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU4Hr1G051970.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU5Hr1G096420.20	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os12g32250	No alias	WRKY96, expressed	0.03	Orthogroups_2024-Update
MA_11072g0010	No alias	(at1g68150 : 82.4) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_126273g0010	No alias	(at1g69310 : 166.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
Mp7g06550.1	No alias	transcription factor (WRKY)	0.02	Orthogroups_2024-Update
PSME_00010717-RA	No alias	(at4g22070 : 177.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00040311-RA	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
PSME_00042021-RA	No alias	(at4g22070 : 263.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00047222-RA	No alias	(at4g04450 : 178.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
Pp1s25_173V6	No alias	wrky11 - superfamily of tfs having wrky and zinc finger domains	0.02	Orthogroups_2024-Update
Seita.3G164900.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.4G033900.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G319000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.9G085700.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G337600.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.007G217700.3	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Solyc08g081630	No alias	WRKY transcription factor 56	0.02	Orthogroups_2024-Update
Sopen08g029910	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004857	enzyme inhibitor activity	IEP	Predicted GO
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015297	antiporter activity	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
MF	GO:0030234	enzyme regulator activity	IEP	Predicted GO
MF	GO:0030570	pectate lyase activity	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO
MF	GO:0098772	molecular function regulator	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	135	197

External Links

No external refs found!

Sobic.005G013400.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation