Sobic.005G013500.1

Description : WRKY-type transcription factor

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.005G013500.1
Cluster	HCAA Clusters: Cluster_262

Target	Alias	Description	ECC score	Gene Family Method
81371	No alias	WRKY DNA-binding protein 9	0.02	Orthogroups_2024-Update
A4A49_13674	No alias	putative wrky transcription factor 48	0.04	Orthogroups_2024-Update
A4A49_26487	No alias	putative wrky transcription factor 65	0.02	Orthogroups_2024-Update
At2g44745	No alias	At2g44745 [Source:UniProtKB/TrEMBL;Acc:Q1PEU5]	0.03	Orthogroups_2024-Update
At4g18170	No alias	WRKY28 [Source:UniProtKB/TrEMBL;Acc:A0A178V3M3]	0.03	Orthogroups_2024-Update
Bradi1g30870	No alias	WRKY DNA-binding protein 18	0.02	Orthogroups_2024-Update
Bradi2g15877	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Bradi4g44342	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
Brara.D00225.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.E00945.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.F03381.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G03696.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.H01800.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G083350	No alias	WRKY DNA-binding protein 72	0.03	Orthogroups_2024-Update
Glyma.05G029000	No alias	WRKY DNA-binding protein 72	0.03	Orthogroups_2024-Update
Glyma.05G184500	No alias	WRKY DNA-binding protein 51	0.02	Orthogroups_2024-Update
Glyma.13G117600	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Glyma.18G056600	No alias	WRKY DNA-binding protein 33	0.01	Orthogroups_2024-Update
Glyma.18G124700	No alias	WRKY DNA-binding protein 72	0.03	Orthogroups_2024-Update
HORVU3Hr1G020140.3	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os01g61080	No alias	WRKY24, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g02420	No alias	WRKY97, expressed	0.02	Orthogroups_2024-Update
MA_138256g0010	No alias	(at1g30650 : 163.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
MA_179641g0010	No alias	(at1g29860 : 118.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
MA_6943842g0010	No alias	(at3g58710 : 149.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
MA_74833g0010	No alias	(at5g15130 : 181.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00012259-RA	No alias	(at1g62300 : 138.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
PSME_00021156-RA	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
PSME_00028886-RA	No alias	(at5g15130 : 207.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00035861-RA	No alias	(at3g01970 : 109.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00036209-RA	No alias	(at4g01720 : 157.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00036210-RA	No alias	(at1g62300 : 137.0) Encodes a transcription factor...	0.04	Orthogroups_2024-Update
PSME_00042021-RA	No alias	(at4g22070 : 263.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
PSME_00047222-RA	No alias	(at4g04450 : 178.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00048777-RA	No alias	(at4g23810 : 118.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00049648-RA	No alias	(at1g62300 : 176.0) Encodes a transcription factor...	0.01	Orthogroups_2024-Update
Potri.001G352400	No alias	WRKY DNA-binding protein 28	0.02	Orthogroups_2024-Update
Potri.001G460600	No alias	WRKY DNA-binding protein 14	0.03	Orthogroups_2024-Update
Potri.002G193000	No alias	WRKY DNA-binding protein 23	0.03	Orthogroups_2024-Update
Potri.004G007500	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Potri.004G072000	No alias	WRKY DNA-binding protein 27	0.04	Orthogroups_2024-Update
Potri.015G099200	No alias	WRKY DNA-binding protein 75	0.03	Orthogroups_2024-Update
Potri.016G137900	No alias	WRKY DNA-binding protein 70	0.02	Orthogroups_2024-Update
Pp1s35_401V6	No alias	wrky transcription	0.02	Orthogroups_2024-Update
Pp1s5_354V6	No alias	wrky transcription	0.02	Orthogroups_2024-Update
Seita.1G334400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.4G197100.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G032600.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G132800.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G306000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.6G218000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.7G301900.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.7G302000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.8G088600.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G084400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G413200.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G421700.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G083000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G084000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G174300.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G200700.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G248400.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G285500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G296300.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G065900.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G117400.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.007G118301.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G100500.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G206800.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G212800.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.009G238200.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.010G209100.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G209200.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Solyc08g067340	No alias	WRKY transcription factor 46	0.02	Orthogroups_2024-Update
Solyc08g082110	No alias	WRKY transcription factor 54	0.02	Orthogroups_2024-Update
Sopen01g031040	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen04g022900	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update
Sopen05g034160	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update
Sopen07g024390	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Predicted GO
BP	GO:0001510	RNA methylation	IEP	Predicted GO
MF	GO:0008134	transcription factor binding	IEP	Predicted GO
MF	GO:0008170	N-methyltransferase activity	IEP	Predicted GO
MF	GO:0008649	rRNA methyltransferase activity	IEP	Predicted GO
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Predicted GO
BP	GO:0009690	cytokinin metabolic process	IEP	Predicted GO
BP	GO:0010817	regulation of hormone levels	IEP	Predicted GO
MF	GO:0016436	rRNA (uridine) methyltransferase activity	IEP	Predicted GO
MF	GO:0017025	TBP-class protein binding	IEP	Predicted GO
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predicted GO
BP	GO:0031167	rRNA methylation	IEP	Predicted GO
BP	GO:0034754	cellular hormone metabolic process	IEP	Predicted GO
BP	GO:0042445	hormone metabolic process	IEP	Predicted GO
MF	GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	IEP	Predicted GO
BP	GO:0070475	rRNA base methylation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	132	194

External Links

No external refs found!

Sobic.005G013500.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation