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  5. Sobic.005G015200.1

Sobic.005G015200.1


Description : Unknown function


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G015200.1
Cluster HCAA Clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
74933 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
A4A49_15521 No alias root phototropism protein 3 0.06 Orthogroups_2024-Update
A4A49_24985 No alias root phototropism protein 2 0.03 Orthogroups_2024-Update
A4A49_25271 No alias btbpoz domain-containing protein npy2 0.02 Orthogroups_2024-Update
At2g30520 No alias Root phototropism protein 2... 0.03 Orthogroups_2024-Update
Bradi1g70761 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Bradi3g46480 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Bradi4g25900 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Brara.C01564.1 No alias phototropin signalling factor *(RPT2) 0.05 Orthogroups_2024-Update
Brara.E01281.1 No alias phototropin signalling factor *(RPT2) 0.05 Orthogroups_2024-Update
Brara.F02310.1 No alias substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Brara.I02813.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J02327.1 No alias substrate adaptor *(DOT3) of CUL3-based E3 ubiquitin... 0.04 Orthogroups_2024-Update
GRMZM2G169782 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
GRMZM2G353024 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.02G153500 No alias Phototropic-responsive NPH3 family protein 0.05 Orthogroups_2024-Update
Glyma.05G104000 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.05G178500 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.08G135600 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.10G020800 No alias Phototropic-responsive NPH3 family protein 0.06 Orthogroups_2024-Update
Glyma.13G320400 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Glyma.14G206100 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.18G216600 No alias Phototropic-responsive NPH3 family protein 0.01 Orthogroups_2024-Update
Glyma.20G133100 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G098170.4 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g10880 No alias BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain... 0.02 Orthogroups_2024-Update
LOC_Os11g02610 No alias BTBN20 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.08 Orthogroups_2024-Update
LOC_Os11g02620 No alias BTBN21 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.07 Orthogroups_2024-Update
Mp4g20760.1 No alias BTB/POZ domain-containing protein At1g30440... 0.04 Orthogroups_2024-Update
PSME_00049332-RA No alias (at5g64330 : 611.0) Involved in blue light response... 0.02 Orthogroups_2024-Update
Potri.010G046800 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Potri.013G159000 No alias Phototropic-responsive NPH3 family protein 0.05 Orthogroups_2024-Update
Potri.017G048200 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Pp1s112_43V6 No alias protein binding 0.05 Orthogroups_2024-Update
Pp1s67_83V6 No alias protein binding 0.03 Orthogroups_2024-Update
Pp1s96_180V6 No alias phototropic-responsive nph3 family protein 0.02 Orthogroups_2024-Update
Seita.1G217500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G303000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.7G303100.1 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase complex 0.05 Orthogroups_2024-Update
Seita.8G012000.1 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Seita.8G012100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G158400.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 Orthogroups_2024-Update
Seita.9G497900.1 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 Orthogroups_2024-Update
Sobic.003G317000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G029700.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 Orthogroups_2024-Update
Sobic.008G145300.3 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
Solyc01g107180 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.06 Orthogroups_2024-Update
Solyc05g051580 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc07g043130 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen01g048130 No alias NPH3 family 0.03 Orthogroups_2024-Update
Sopen01g049440 No alias NPH3 family 0.02 Orthogroups_2024-Update
Sopen02g037130 No alias NPH3 family 0.03 Orthogroups_2024-Update
Sopen05g008470 No alias NPH3 family 0.05 Orthogroups_2024-Update
Sopen05g030030 No alias NPH3 family 0.04 Orthogroups_2024-Update
Sopen06g002790 No alias NPH3 family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 185 444
No external refs found!