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  5. Sobic.005G022800.2

Sobic.005G022800.2


Description : Unknown function


Gene families : OG_42_0004079 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G022800.2
Cluster HCAA Clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Bradi4g00640 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 Orthogroups_2024-Update
Brara.I03945.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Cre07.g315400 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
GRMZM2G035042 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Glyma.03G132000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Orthogroups_2024-Update
LOC_Os06g30380 No alias GTP binding protein, putative, expressed 0.03 Orthogroups_2024-Update
Seita.6G161200.1 No alias Unknown function 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006788 heme oxidation IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0042586 peptide deformylase activity IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006073 GTP_binding_domain 411 486
No external refs found!