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  5. Sobic.005G024300.1

Sobic.005G024300.1


Description : calcium sensor *(CML)


Gene families : OG_42_0000315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G024300.1
Cluster HCAA Clusters: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
107557 No alias calmodulin 5 0.05 Orthogroups_2024-Update
141966 No alias calmodulin 5 0.02 Orthogroups_2024-Update
Brara.C02103.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.05 Orthogroups_2024-Update
GRMZM2G395244 No alias calmodulin 5 0.02 Orthogroups_2024-Update
Glyma.20G224300 No alias calmodulin 8 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 14 75
IPR002048 EF_hand_dom 89 151
No external refs found!