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  5. Sobic.005G026100.1

Sobic.005G026100.1


Description : hydroxymethylglutaryl-CoA lyase & EC_4.1 carbon-carbon lyase


Gene families : OG_42_0002941 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G026100.1
Cluster HCAA Clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
A4A49_03811 No alias hydroxymethylglutaryl-coa lyase, mitochondrial 0.03 Orthogroups_2024-Update
At2g26800 No alias Hydroxymethylglutaryl-CoA lyase, mitochondrial... 0.06 Orthogroups_2024-Update
Bradi4g43510 No alias Aldolase superfamily protein 0.03 Orthogroups_2024-Update
Brara.C02450.1 No alias hydroxymethylglutaryl-CoA lyase & EC_4.1 carbon-carbon lyase 0.05 Orthogroups_2024-Update
GRMZM2G095141 No alias Aldolase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G235400 No alias Aldolase superfamily protein 0.04 Orthogroups_2024-Update
Glyma.20G043000 No alias Aldolase superfamily protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G044410.2 No alias hydroxymethylglutaryl-CoA lyase & EC_4.1 carbon-carbon lyase 0.06 Orthogroups_2024-Update
Pp1s138_43V6 No alias hydroxymethylglutaryl- lyase 0.03 Orthogroups_2024-Update
Seita.7G314500.1 No alias hydroxymethylglutaryl-CoA lyase & EC_4.1 carbon-carbon lyase 0.05 Orthogroups_2024-Update
Seita.8G022200.1 No alias hydroxymethylglutaryl-CoA lyase & EC_4.1 carbon-carbon lyase 0.09 Orthogroups_2024-Update
Solyc11g065070 No alias Hydroxymethylglutaryl-CoA lyase (AHRD V3.3 *** W9QRW1_9ROSA) 0.06 Orthogroups_2024-Update
Sopen11g024810 No alias HMGL-like 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0009975 cyclase activity IEP Predicted GO
MF GO:0009976 tocopherol cyclase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000891 PYR_CT 90 363
No external refs found!