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  5. Sobic.005G026500.2

Sobic.005G026500.2


Description : Unknown function


Gene families : OG_42_0000929 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G026500.2
Cluster HCAA Clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14190 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.08 Orthogroups_2024-Update
GRMZM2G416201 No alias rna processing factor 2 0.02 Orthogroups_2024-Update
HORVU1Hr1G011150.3 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os10g35440 No alias pentatricopeptide repeat domain containing protein,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 589 618
IPR002885 Pentatricopeptide_repeat 345 374
IPR002885 Pentatricopeptide_repeat 450 479
IPR002885 Pentatricopeptide_repeat 622 668
IPR002885 Pentatricopeptide_repeat 481 529
IPR002885 Pentatricopeptide_repeat 376 425
IPR002885 Pentatricopeptide_repeat 201 250
IPR002885 Pentatricopeptide_repeat 275 320
IPR002885 Pentatricopeptide_repeat 90 112
IPR002885 Pentatricopeptide_repeat 548 579
IPR002885 Pentatricopeptide_repeat 160 191
No external refs found!