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  5. Sobic.005G029400.1

Sobic.005G029400.1


Description : EC_4.3 carbon-nitrogen lyase


Gene families : OG_42_0000149 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G029400.1
Cluster HCAA Clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
110258 No alias Calcium-dependent phosphotriesterase superfamily protein 0.03 Orthogroups_2024-Update
Brara.D00206.1 No alias regulatory protein *(LAP3) of exine formation & EC_4.3... 0.04 Orthogroups_2024-Update
Glyma.03G130200 No alias strictosidine synthase-like 2 0.03 Orthogroups_2024-Update
Glyma.04G156702 No alias Calcium-dependent phosphotriesterase superfamily protein 0.07 Orthogroups_2024-Update
Glyma.13G311067 No alias strictosidine synthase-like 3 0.03 Orthogroups_2024-Update
Seita.1G343100.1 No alias EC_4.3 carbon-nitrogen lyase 0.02 Orthogroups_2024-Update
Seita.1G343200.1 No alias EC_4.3 carbon-nitrogen lyase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
MF GO:0016844 strictosidine synthase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 172 258
No external refs found!