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  5. Sobic.005G036900.1

Sobic.005G036900.1


Description : Unknown function


Gene families : OG_42_0000359 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G036900.1
Cluster HCAA Clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G249700 No alias Late embryogenesis abundant (LEA) protein-related 0.04 Orthogroups_2024-Update
HORVU0Hr1G039790.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Kfl00180_0140 kfl00180_0140_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Mpzg00310.1 No alias no hits & (original description: none) 0.04 Orthogroups_2024-Update
PSME_00010432-RA No alias (at3g19430 : 244.0) late embryogenesis abundant... 0.02 Orthogroups_2024-Update
PSME_00044607-RA No alias (at3g19430 : 323.0) late embryogenesis abundant... 0.03 Orthogroups_2024-Update
Pp1s82_83V6 No alias No description available 0.03 Orthogroups_2024-Update
Sobic.003G441800.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR009646 Root_cap 259 314
No external refs found!