Sobic.005G038500.1

Description : Unknown function

Gene families : OG_42_0009239 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009239_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.005G038500.1
Cluster	HCAA Clusters: Cluster_128

Target	Alias	Description	ECC score	Gene Family Method	Actions
Seita.7G325000.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Sopen05g004400	No alias	PPR repeat family	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Predicted GO
MF	GO:0004843	thiol-dependent ubiquitin-specific protease activity	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
MF	GO:0008234	cysteine-type peptidase activity	IEP	Predicted GO
BP	GO:0016579	protein deubiquitination	IEP	Predicted GO
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Predicted GO
BP	GO:0035556	intracellular signal transduction	IEP	Predicted GO
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEP	Predicted GO
BP	GO:0070646	protein modification by small protein removal	IEP	Predicted GO
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Predicted GO
MF	GO:0101005	ubiquitinyl hydrolase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	241	287
IPR002885	Pentatricopeptide_repeat	594	641
IPR002885	Pentatricopeptide_repeat	417	463
IPR002885	Pentatricopeptide_repeat	347	396
IPR002885	Pentatricopeptide_repeat	522	570
IPR002885	Pentatricopeptide_repeat	315	345
IPR002885	Pentatricopeptide_repeat	658	690

External Links

No external refs found!