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  5. Sobic.005G042700.1

Sobic.005G042700.1


Description : transcriptional co-regulator *(OFP)


Gene families : OG_42_0001535 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001535_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G042700.1
Cluster HCAA Clusters: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G430871 No alias ovate family protein 13 0.03 Orthogroups_2024-Update
Glyma.19G197700 No alias ovate family protein 13 0.03 Orthogroups_2024-Update
HORVU1Hr1G074030.1 No alias transcriptional co-regulator *(OFP) 0.03 Orthogroups_2024-Update
HORVU2Hr1G073400.4 No alias transcriptional co-regulator *(OFP) 0.02 Orthogroups_2024-Update
LOC_Os05g36990 No alias ATOFP18/OFP18, putative, expressed 0.03 Orthogroups_2024-Update
Potri.008G017500 No alias ovate family protein 13 0.03 Orthogroups_2024-Update
Seita.3G225700.1 No alias transcriptional co-regulator *(OFP) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006458 Ovate_C 256 312
No external refs found!