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  5. Sobic.005G045600.1

Sobic.005G045600.1


Description : EC_2.1 transferase transferring one-carbon group


Gene families : OG_42_0000016 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G045600.1
Cluster HCAA Clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
124205 No alias O-methyltransferase 1 0.03 Orthogroups_2024-Update
At5g54160 No alias Flavone 3'-O-methyltransferase 1... 0.02 Orthogroups_2024-Update
Brara.F01512.1 No alias EC_2.1 transferase transferring one-carbon group 0.04 Orthogroups_2024-Update
Brara.G01119.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Glyma.04G227700 No alias O-methyltransferase 1 0.03 Orthogroups_2024-Update
Glyma.09G281800 No alias O-methyltransferase 1 0.03 Orthogroups_2024-Update
Glyma.20G176100 No alias O-methyltransferase 1 0.06 Orthogroups_2024-Update
LOC_Os12g10170 No alias O-methyltransferase, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00009784-RA No alias (p28002|comt1_medsa : 427.0) Caffeic acid... 0.03 Orthogroups_2024-Update
PSME_00048439-RA No alias (p28002|comt1_medsa : 428.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00052789-RA No alias (p28002|comt1_medsa : 239.0) Caffeic acid... 0.03 Orthogroups_2024-Update
Potri.019G093100 No alias O-methyltransferase family protein 0.04 Orthogroups_2024-Update
Seita.7G073700.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Seita.8G210100.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Seita.9G374200.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Sobic.007G074800.1 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA 16Dec
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR012967 Plant_MeTrfase_dimerisation 34 82
IPR001077 O_MeTrfase_2 141 353
No external refs found!