1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.005G061000.1

Sobic.005G061000.1


Description : subfamily ABCG transporter


Gene families : OG_42_0000429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G061000.1
Cluster HCAA Clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Brara.G02382.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Glyma.16G110100 No alias ATP-binding cassette 14 0.02 Orthogroups_2024-Update
Potri.006G199500 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Solyc08g075430 No alias ABC transporter family protein (AHRD V3.3 *** U5GKR9_POPTR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 398 603
IPR003439 ABC_transporter-like 96 247
No external refs found!