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  5. Sobic.005G062000.2

Sobic.005G062000.2


Description : MYB class-R2R3 subgroup-4 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G062000.2
Cluster HCAA Clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
At3g61250 No alias Transcription factor MYB41... 0.02 Orthogroups_2024-Update
Bradi2g01960 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Brara.B00668.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.B01492.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.B02106.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B03816.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Brara.E02832.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Brara.F01573.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Brara.H02857.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G048136 No alias myb domain protein 59 0.03 Orthogroups_2024-Update
GRMZM2G052606 No alias myb domain protein 46 0.03 Orthogroups_2024-Update
Glyma.07G054000 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.07G126900 No alias myb domain protein 68 0.04 Orthogroups_2024-Update
Glyma.11G133700 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.12G057900 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Glyma.13G247200 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.18G261400 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
Glyma.19G022100 No alias myb domain protein 30 0.03 Orthogroups_2024-Update
HORVU2Hr1G051010.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G051030.3 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G106400.3 No alias MYB class-R2R3 subgroup-3 transcription factor & MYB... 0.04 Orthogroups_2024-Update
LOC_Os01g19970 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g43580 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g48870 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os08g43550 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G267300 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Potri.007G007900 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Potri.008G101400 No alias myb domain protein 108 0.04 Orthogroups_2024-Update
Potri.008G122100 No alias myb domain protein 62 0.02 Orthogroups_2024-Update
Potri.009G053900 No alias myb domain protein 46 0.03 Orthogroups_2024-Update
Pp1s6_416V6 No alias myb transcription factor 0.02 Orthogroups_2024-Update
Seita.8G057800.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Seita.9G384800.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G358900.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G404400.2 No alias transcriptional regulator *(TDF1) & MYB class-R2R3... 0.04 Orthogroups_2024-Update
Sobic.006G148000.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Solyc02g087960 No alias R2R3MYB transcription factor 94 0.02 Orthogroups_2024-Update
Solyc03g059200 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRF2_SALMI) 0.02 Orthogroups_2024-Update
Solyc11g069030 No alias blind 0.03 Orthogroups_2024-Update
Solyc12g005640 No alias R2R3MYB transcription factor 68 0.03 Orthogroups_2024-Update
Sopen01g034190 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen05g004090 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 111
No external refs found!