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  5. Sobic.005G062300.1

Sobic.005G062300.1


Description : Unknown function


Gene families : OG_42_0000144 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G062300.1
Cluster HCAA Clusters: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
A4A49_06021 No alias protein quirky 0.02 Orthogroups_2024-Update
A4A49_31513 No alias ft-interacting protein 1 0.03 Orthogroups_2024-Update
A4A49_37593 No alias ft-interacting protein 1 0.03 Orthogroups_2024-Update
At5g06850 No alias FT-interacting protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL59] 0.03 Orthogroups_2024-Update
Bradi5g27530 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.04 Orthogroups_2024-Update
Brara.B02555.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.C00268.1 No alias regulatory protein *(FTIP) of florigen movement 0.04 Orthogroups_2024-Update
Brara.C02898.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.D00113.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I04260.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I05508.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G000195 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 Orthogroups_2024-Update
Glyma.07G072500 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 Orthogroups_2024-Update
Glyma.09G261200 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.02 Orthogroups_2024-Update
HORVU6Hr1G063800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os09g27540 No alias C2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10431772g0010 No alias (at1g74720 : 176.0) Encodes a putative transmembrane... 0.03 Orthogroups_2024-Update
MA_105093g0010 No alias (at3g57880 : 1222.0) Calcium-dependent lipid-binding... 0.03 Orthogroups_2024-Update
MA_121607g0010 No alias (at3g57880 : 163.0) Calcium-dependent lipid-binding... 0.05 Orthogroups_2024-Update
PSME_00025673-RA No alias (at5g12970 : 132.0) Calcium-dependent lipid-binding... 0.01 Orthogroups_2024-Update
PSME_00056635-RA No alias (at4g11610 : 1198.0) C2 calcium/lipid-binding plant... 0.03 Orthogroups_2024-Update
Potri.001G105400 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.02 Orthogroups_2024-Update
Pp1s375_16V6 No alias c2 domain-containing protein 0.03 Orthogroups_2024-Update
Seita.2G043200.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.004G290300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g086700 No alias C2 calcium/lipid-binding and GRAM domain protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc03g095420 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 Orthogroups_2024-Update
Sopen01g003150 No alias Plant phosphoribosyltransferase C-terminal 0.02 Orthogroups_2024-Update
Sopen01g026820 No alias Plant phosphoribosyltransferase C-terminal 0.02 Orthogroups_2024-Update
Sopen03g032250 No alias Plant phosphoribosyltransferase C-terminal 0.03 Orthogroups_2024-Update
Sopen10g030970 No alias Plant phosphoribosyltransferase C-terminal 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 256 340
IPR000008 C2_dom 586 692
IPR000008 C2_dom 411 497
IPR000008 C2_dom 2 94
IPR013583 PRibTrfase_C 845 999
No external refs found!