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  5. Sobic.005G063300.1

Sobic.005G063300.1


Description : fatty acyl CoA reductase *(FAR)


Gene families : OG_42_0000301 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G063300.1
Cluster HCAA Clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
A4A49_24360 No alias fatty acyl-coa reductase 3 0.04 Orthogroups_2024-Update
At3g44540 No alias Probable fatty acyl-CoA reductase 4... 0.03 Orthogroups_2024-Update
At3g44550 No alias Probable fatty acyl-CoA reductase 5... 0.02 Orthogroups_2024-Update
Bradi2g47121 No alias fatty acid reductase 4 0.03 Orthogroups_2024-Update
Bradi4g38460 No alias fatty acid reductase 4 0.03 Orthogroups_2024-Update
Brara.G01715.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.13G317700 No alias Jojoba acyl CoA reductase-related male sterility protein 0.04 Orthogroups_2024-Update
LOC_Os08g44360 No alias male sterility protein 2, putative, expressed 0.03 Orthogroups_2024-Update
MA_10122399g0010 No alias (at3g44540 : 168.0) Encodes a member of the eight-member... 0.03 Orthogroups_2024-Update
PSME_00008784-RA No alias (at3g44540 : 392.0) Encodes a member of the eight-member... 0.03 Orthogroups_2024-Update
PSME_00015275-RA No alias (at3g44540 : 421.0) Encodes a member of the eight-member... 0.02 Orthogroups_2024-Update
PSME_00015276-RA No alias (at3g44540 : 403.0) Encodes a member of the eight-member... 0.03 Orthogroups_2024-Update
PSME_00019002-RA No alias (at3g44540 : 395.0) Encodes a member of the eight-member... 0.02 Orthogroups_2024-Update
PSME_00030498-RA No alias (at3g44540 : 380.0) Encodes a member of the eight-member... 0.02 Orthogroups_2024-Update
Potri.004G185100 No alias Jojoba acyl CoA reductase-related male sterility protein 0.03 Orthogroups_2024-Update
Sobic.007G170700.1 No alias fatty acyl CoA reductase *(FAR) 0.03 Orthogroups_2024-Update
Sobic.007G170800.1 No alias fatty acyl CoA reductase *(FAR) 0.04 Orthogroups_2024-Update
Solyc09g005940 No alias Fatty acyl-CoA reductase (AHRD V3.3 *** K4CQ84_SOLLC) 0.03 Orthogroups_2024-Update
Solyc11g067170 No alias Fatty acyl-CoA reductase (AHRD V3.3 *-* K4D9X4_SOLLC) 0.02 Orthogroups_2024-Update
Sopen01g046640 No alias Male sterility protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR013120 Male_sterile_NAD-bd 22 322
IPR033640 FAR_C 407 509
No external refs found!