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  5. Sobic.005G079201.1

Sobic.005G079201.1


Description : Unknown function


Gene families : OG_42_0000187 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000187_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G079201.1
Cluster HCAA Clusters: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Bradi1g18326 No alias F-box/RNI-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi1g18329 No alias RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g19477 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G037320.9 No alias Unknown function 0.08 Orthogroups_2024-Update
LOC_Os08g09740 No alias OsFBX274 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g09750 No alias OsFBL44 - F-box domain and LRR containing protein, expressed 0.05 Orthogroups_2024-Update
LOC_Os11g09670 No alias OsFBX409 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g10180 No alias OsFBX412 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.1G188800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G031800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G154500.3 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!