Sobic.005G090800.1

Description : PHD finger transcription factor

Gene families : OG_42_0001013 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001013_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.005G090800.1
Cluster	HCAA Clusters: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
Brara.B03070.1	No alias	PHD finger transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G408897	No alias	RING/FYVE/PHD zinc finger superfamily protein	0.02	Orthogroups_2024-Update
Glyma.14G212300	No alias	RING/FYVE/PHD zinc finger superfamily protein	0.03	Orthogroups_2024-Update
Sobic.001G113900.1	No alias	PHD finger transcription factor & meiotic recombination...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Predicted GO
MF	GO:0004386	helicase activity	IEP	Predicted GO
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predicted GO
MF	GO:0016462	pyrophosphatase activity	IEP	Predicted GO
BP	GO:0016567	protein ubiquitination	IEP	Predicted GO
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Predicted GO
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Predicted GO
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Predicted GO
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predicted GO
BP	GO:0032446	protein modification by small protein conjugation	IEP	Predicted GO
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR019787	Znf_PHD-finger	603	648

External Links

No external refs found!