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  5. Sobic.005G095600.1

Sobic.005G095600.1


Description : Unknown function


Gene families : OG_42_0000068 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G095600.1
Cluster HCAA Clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
A4A49_07274 No alias putative late blight resistance protein-like r1b-16 0.02 Orthogroups_2024-Update
A4A49_07855 No alias putative late blight resistance protein-like r1b-12 0.02 Orthogroups_2024-Update
At3g46530 No alias Disease resistance protein RPP13... 0.03 Orthogroups_2024-Update
Bradi1g00234 No alias NB-ARC domain-containing disease resistance protein 0.01 Orthogroups_2024-Update
Brara.B03684.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.18G093600 No alias NB-ARC domain-containing disease resistance protein 0.01 Orthogroups_2024-Update
HORVU0Hr1G005620.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G001630.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G096920.6 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G008210.5 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os04g46300 No alias disease resistance protein RPM1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g32880 No alias disease resistance protein RPM1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g30230 No alias disease resistance protein RPM1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g21400 No alias disease resistance protein RPM1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g35580 No alias disease resistance protein RPM1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g45330 No alias disease resistance protein RPM1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g14330 No alias disease resistance protein RPM1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g31620 No alias disease resistance protein RPM1, putative, expressed 0.04 Orthogroups_2024-Update
Potri.005G011500 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.018G013500 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Seita.8G064200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G064900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G089200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g009110 No alias Nbs-lrr resistance protein (AHRD V3.3 *** A0A061FZT5_THECC) 0.02 Orthogroups_2024-Update
Solyc04g009660 No alias LOW QUALITY:Nbs-lrr resistance protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc10g047320 No alias Disease resistance protein (CC-NBS-LRR class) family... 0.02 Orthogroups_2024-Update
Sopen10g017600 No alias NB-ARC domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 173 354
IPR002182 NB-ARC 425 490
No external refs found!