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  5. Sobic.005G101900.1

Sobic.005G101900.1


Description : EC_2.1 transferase transferring one-carbon group


Gene families : OG_42_0000016 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G101900.1
Cluster HCAA Clusters: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G140996 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Kfl00216_0100 kfl00216_0100_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os07g27880 No alias O-methyltransferase, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os10g02880 No alias O-methyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g10170 No alias O-methyltransferase, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00022014-RA No alias (at5g54160 : 209.0) A caffeic acid/5-hydroxyferulic acid... 0.03 Orthogroups_2024-Update
PSME_00052789-RA No alias (p28002|comt1_medsa : 239.0) Caffeic acid... 0.03 Orthogroups_2024-Update
Seita.8G093200.1 No alias EC_2.1 transferase transferring one-carbon group 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA 16Dec
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0007265 Ras protein signal transduction IEP Predicted GO
BP GO:0007266 Rho protein signal transduction IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050525 cutinase activity IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR012967 Plant_MeTrfase_dimerisation 34 82
IPR001077 O_MeTrfase_2 138 347
No external refs found!