1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.005G103800.1

Sobic.005G103800.1


Description : small GTPase *(Sar1)


Gene families : OG_42_0001169 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001169_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G103800.1
Cluster HCAA Clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
165998 No alias secretion-associated RAS super family 2 0.02 Orthogroups_2024-Update
At1g09180 No alias Putative GTP-binding protein, SAR1B... 0.03 Orthogroups_2024-Update
Bradi2g09070 No alias secretion-associated RAS super family 2 0.03 Orthogroups_2024-Update
Bradi4g04830 No alias secretion-associated RAS super family 2 0.02 Orthogroups_2024-Update
Cre11.g468300 No alias secretion-associated RAS super family 2 0.02 Orthogroups_2024-Update
Potri.008G107800 No alias secretion-associated RAS super family 2 0.03 Orthogroups_2024-Update
Potri.010G141900 No alias secretion-associated RAS super family 2 0.04 Orthogroups_2024-Update
Seita.3G335900.1 No alias small GTPase *(Sar1) 0.04 Orthogroups_2024-Update
Sopen01g026280 No alias ADP-ribosylation factor family 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA 16Dec
MF GO:0005525 GTP binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 9 193
No external refs found!