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  5. Sobic.005G110600.1

Sobic.005G110600.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0001295 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001295_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G110600.1
Cluster HCAA Clusters: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
410071 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.02 Orthogroups_2024-Update
Glyma.15G206400 No alias S-locus lectin protein kinase family protein 0.03 Orthogroups_2024-Update
LOC_Os04g30770 No alias glycosyl hydrolase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00004876-RA No alias (at4g19810 : 338.0) Glycosyl hydrolase family protein... 0.04 Orthogroups_2024-Update
PSME_00044502-RA No alias (at4g19810 : 290.0) Glycosyl hydrolase family protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006788 heme oxidation IEP Predicted GO
BP GO:0008285 negative regulation of cell proliferation IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0042127 regulation of cell proliferation IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 41 380
No external refs found!