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  5. Sobic.005G111400.1

Sobic.005G111400.1


Description : phospholipase-A1 *(PC-PLA1)


Gene families : OG_42_0000082 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G111400.1
Cluster HCAA Clusters: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
A4A49_02601 No alias phospholipase a1-igamma2, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_16668 No alias phospholipase a1-igamma1, chloroplastic 0.04 Orthogroups_2024-Update
A4A49_18741 No alias phospholipase a1-iigamma 0.05 Orthogroups_2024-Update
A4A49_25804 No alias phospholipase a1-ibeta2, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_42852 No alias phospholipase a1-ii 1 0.03 Orthogroups_2024-Update
At1g51440 No alias Phospholipase A1-Igamma3, chloroplastic... 0.02 Orthogroups_2024-Update
At4g18550 No alias alpha/beta-Hydrolases superfamily protein... 0.03 Orthogroups_2024-Update
Bradi2g47970 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g36540 No alias alpha/beta-Hydrolases superfamily protein 0.04 Orthogroups_2024-Update
Brara.A01852.1 No alias phospholipase-A1 *(PC-PLA1) 0.02 Orthogroups_2024-Update
GRMZM2G321290 No alias alpha/beta-Hydrolases superfamily protein 0.04 Orthogroups_2024-Update
Glyma.03G159000 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os01g46250 No alias lipase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g67430 No alias lipase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g42170 No alias phospholipase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10430133g0010 No alias (at1g06800 : 469.0) Encodes a lipase that hydrolyzes... 0.05 Orthogroups_2024-Update
MA_10432434g0010 No alias (at1g06800 : 543.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
MA_1516g0010 No alias (at2g30550 : 271.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
PSME_00007319-RA No alias (at2g30550 : 238.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
PSME_00027904-RA No alias (at1g06800 : 535.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
PSME_00050034-RA No alias (at4g16820 : 374.0) Encodes a lipase that hydrolyzes... 0.01 Orthogroups_2024-Update
PSME_00054288-RA No alias (at1g06800 : 337.0) Encodes a lipase that hydrolyzes... 0.03 Orthogroups_2024-Update
PSME_00056842-RA No alias (at2g42690 : 407.0) alpha/beta-Hydrolases superfamily... 0.02 Orthogroups_2024-Update
PSME_00057109-RA No alias (at1g06800 : 534.0) Encodes a lipase that hydrolyzes... 0.02 Orthogroups_2024-Update
Potri.001G153100 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G081500 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G150700 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G026400 No alias alpha/beta-Hydrolases superfamily protein 0.04 Orthogroups_2024-Update
Seita.1G256800.1 No alias phospholipase-A1 *(PC-PLA1) 0.04 Orthogroups_2024-Update
Seita.3G063700.1 No alias phospholipase-A1 *(PC-PLA1) 0.04 Orthogroups_2024-Update
Seita.3G302300.1 No alias phospholipase-A1 *(PC-PLA1) 0.04 Orthogroups_2024-Update
Seita.5G416000.1 No alias phospholipase-A1 *(PC-PLA1) 0.04 Orthogroups_2024-Update
Seita.9G320000.1 No alias phospholipase-A1 *(PC-PLA1) 0.03 Orthogroups_2024-Update
Sobic.004G297600.1 No alias phospholipase-A1 *(PC-PLA1) 0.03 Orthogroups_2024-Update
Solyc02g077100 No alias Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen02g022320 No alias Lipase (class 3) 0.02 Orthogroups_2024-Update
Sopen08g026590 No alias Lipase (class 3) 0.03 Orthogroups_2024-Update
Sopen11g025270 No alias Lipase (class 3) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 199 356
No external refs found!