Sobic.005G112300.1

Description : deubiquitinase *(UBP5/8-11)

Gene families : OG_42_0001186 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001186_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.005G112300.1
Cluster	HCAA Clusters: Cluster_234

Target	Alias	Description	ECC score	Gene Family Method
At4g10590	No alias	AT4G10590 protein [Source:UniProtKB/TrEMBL;Acc:B9DFI6]	0.03	Orthogroups_2024-Update
Bradi4g19177	No alias	ubiquitin-specific protease 5	0.02	Orthogroups_2024-Update
Glyma.10G172400	No alias	ubiquitin-specific protease 9	0.06	Orthogroups_2024-Update
HORVU1Hr1G033740.1	No alias	deubiquitinase *(UBP5/8-11)	0.03	Orthogroups_2024-Update
Seita.8G116100.1	No alias	deubiquitinase *(UBP5/8-11)	0.03	Orthogroups_2024-Update
evm.model.tig00000194.47	No alias	(at1g32850 : 411.0) ubiquitin-specific protease 11...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	thiol-dependent ubiquitin-specific protease activity	IEA	16Dec
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	16Dec
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein-specific protease activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	ubiquitinyl hydrolase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Predicted GO
CC	GO:0005666	RNA polymerase III complex	IEP	Predicted GO
BP	GO:0006383	transcription by RNA polymerase III	IEP	Predicted GO
CC	GO:0030880	RNA polymerase complex	IEP	Predicted GO
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	Predicted GO
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Predicted GO
CC	GO:1990234	transferase complex	IEP	Predicted GO
MF	GO:1990380	Lys48-specific deubiquitinase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR029346	USP_C	488	628
IPR001394	Peptidase_C19_UCH	313	885
IPR006615	Pept_C19_DUSP	33	136

External Links

No external refs found!

Sobic.005G112300.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation