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At3g58570


Description : DEAD-box ATP-dependent RNA helicase 52 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2F9]


Gene families : OG_42_0001585 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001585_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g58570
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Brara.D02584.1 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.05 Orthogroups_2024-Update
Brara.G01805.1 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.03 Orthogroups_2024-Update
Brara.I04034.1 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.06 Orthogroups_2024-Update
HORVU5Hr1G109340.3 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.02 Orthogroups_2024-Update
Pp1s163_136V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.9G047600.1 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004363 glutathione synthase activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006750 glutathione biosynthetic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 385 500
IPR011545 DEAD/DEAH_box_helicase_dom 170 350
No external refs found!