Sobic.005G139075.1


Description : Unknown function


Gene families : OG_42_0001181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G139075.1
Cluster HCAA Clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Brara.I02965.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G057506 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.08G301500 No alias Function unknown 0.02 Orthogroups_2024-Update
LOC_Os07g46510 No alias expressed protein 0.02 Orthogroups_2024-Update
PSME_00044053-RA No alias (at1g28190 : 81.3) unknown protein; BEST Arabidopsis... 0.03 Orthogroups_2024-Update
Potri.009G071100 No alias Function unknown 0.03 Orthogroups_2024-Update
Seita.3G260000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G141500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen04g025670 No alias Domain of unknown function (DUF4228) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 1 169
No external refs found!