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At3g58980


Description : F-box/LRR-repeat protein At3g58980 [Source:UniProtKB/Swiss-Prot;Acc:P0C2G1]


Gene families : OG_42_0000608 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000608_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g58980
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
At3g58860 No alias Putative F-box protein At3g58860... 0.05 Orthogroups_2024-Update
At4g13960 No alias F-box/RNI-like superfamily protein [Source:TAIR;Acc:AT4G13960] 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006481 C-terminal protein methylation IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
BP GO:0018410 C-terminal protein amino acid modification IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0043687 post-translational protein modification IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 452 480
IPR013101 Leu-rich_rpt_2 153 179
IPR001810 F-box_dom 3 38
No external refs found!