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  5. At3g59060

At3g59060


Description : Transcription factor PIF5 [Source:UniProtKB/Swiss-Prot;Acc:Q84LH8]


Gene families : OG_42_0000449 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g59060
Cluster HCCA clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
118904 No alias phytochrome interacting factor 3 0.04 Orthogroups_2024-Update
39143 No alias phytochrome interacting factor 3 0.02 Orthogroups_2024-Update
A4A49_38454 No alias transcription factor pif5 0.05 Orthogroups_2024-Update
Bradi1g13980 No alias phytochrome interacting factor 3-like 5 0.03 Orthogroups_2024-Update
Brara.C02178.1 No alias regulatory protein *(PIF) of red/far-red light... 0.09 Orthogroups_2024-Update
Brara.C04242.1 No alias bHLH-type transcription factor 0.07 Orthogroups_2024-Update
Brara.D02603.1 No alias regulatory protein *(PIF) of red/far-red light... 0.08 Orthogroups_2024-Update
Brara.F00609.1 No alias regulatory protein *(PIF) of red/far-red light... 0.05 Orthogroups_2024-Update
Brara.I04061.1 No alias regulatory protein *(PIF) of red/far-red light... 0.07 Orthogroups_2024-Update
Brara.I05268.1 No alias regulatory protein *(PIF) of red/far-red light... 0.07 Orthogroups_2024-Update
GRMZM2G016756 No alias phytochrome interacting factor 4 0.06 Orthogroups_2024-Update
GRMZM2G042920 No alias phytochrome interacting factor 3 0.02 Orthogroups_2024-Update
GRMZM2G062541 No alias phytochrome interacting factor 3 0.03 Orthogroups_2024-Update
Glyma.02G282100 No alias phytochrome interacting factor 4 0.04 Orthogroups_2024-Update
Glyma.08G303900 No alias phytochrome interacting factor 4 0.04 Orthogroups_2024-Update
Glyma.18G115700 No alias phytochrome interacting factor 4 0.05 Orthogroups_2024-Update
HORVU2Hr1G060680.1 No alias regulatory protein *(PIF) of red/far-red light... 0.03 Orthogroups_2024-Update
HORVU5Hr1G011780.5 No alias regulatory protein *(PIF) of red/far-red light... 0.03 Orthogroups_2024-Update
HORVU5Hr1G093310.11 No alias regulatory protein *(PIF) of red/far-red light... 0.02 Orthogroups_2024-Update
HORVU5Hr1G102240.2 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Kfl00086_0300 kfl00086_0300_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os03g43810 No alias helix-loop-helix DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g56950 No alias phytochrome-interacting factor 4, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G124400 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G207200 No alias phytochrome interacting factor 4 0.03 Orthogroups_2024-Update
Potri.013G001300 No alias phytochrome interacting factor 3 0.03 Orthogroups_2024-Update
Pp1s147_126V6 No alias helix-loop-helix dna-binding domain containing expressed 0.04 Orthogroups_2024-Update
Seita.2G029600.1 No alias regulatory protein *(PIF) of red/far-red light... 0.03 Orthogroups_2024-Update
Seita.3G384900.1 No alias regulatory protein *(PIF) of red/far-red light... 0.04 Orthogroups_2024-Update
Seita.9G067200.1 No alias regulatory protein *(PIF) of red/far-red light... 0.04 Orthogroups_2024-Update
Seita.9G160700.1 No alias regulatory protein *(PIF) of red/far-red light... 0.03 Orthogroups_2024-Update
Sobic.001G068301.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G163700.3 No alias regulatory protein *(PIF) of red/far-red light... 0.03 Orthogroups_2024-Update
Solyc07g043580 No alias bHLH transcription factor 052 0.04 Orthogroups_2024-Update
Solyc09g063010 No alias bHLH transcription factor 058 0.03 Orthogroups_2024-Update
Sopen07g023150 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen09g025180 No alias Helix-loop-helix DNA-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 260 306
No external refs found!