Sobic.005G169400.1

Description : Unknown function

Gene families : OG_42_0001762 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001762_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.005G169400.1
Cluster	HCAA Clusters: Cluster_80

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G117971	No alias	pathogenesis-related 4	0.04	Orthogroups_2024-Update
HORVU3Hr1G113120.2	No alias	Unknown function	0.06	Orthogroups_2024-Update
HORVU3Hr1G113620.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os11g37970	No alias	WIP5 - Wound-induced protein precursor, expressed	0.02	Orthogroups_2024-Update
MA_10428528g0010	No alias	(at3g04720 : 124.0) Encodes a protein similar to the...	0.05	Orthogroups_2024-Update
MA_10434174g0010	No alias	(p29063\|pr4b_tobac : 207.0) Pathogenesis-related protein...	0.03	Orthogroups_2024-Update
MA_321399g0010	No alias	(p09761\|win1_soltu : 201.0) Wound-induced protein WIN1...	0.03	Orthogroups_2024-Update
MA_8035959g0010	No alias	(p29063\|pr4b_tobac : 191.0) Pathogenesis-related protein...	0.03	Orthogroups_2024-Update
Mp2g21910.1	No alias	Hevein-like preproprotein OS=Arabidopsis thaliana...	0.02	Orthogroups_2024-Update
PSME_00007895-RA	No alias	(p29063\|pr4b_tobac : 193.0) Pathogenesis-related protein...	0.05	Orthogroups_2024-Update
PSME_00054279-RA	No alias	(p09761\|win1_soltu : 201.0) Wound-induced protein WIN1...	0.05	Orthogroups_2024-Update
Potri.013G041700	No alias	pathogenesis-related 4	0.03	Orthogroups_2024-Update
Seita.8G169900.1	No alias	Unknown function	0.06	Orthogroups_2024-Update
Seita.8G170000.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Seita.8G170100.1	No alias	Unknown function	0.08	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0042742	defense response to bacterium	IEA	16Dec
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0050832	defense response to fungus	IEA	16Dec
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051704	multi-organism process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
BP	GO:0001101	response to acid chemical	IEP	Predicted GO
MF	GO:0003677	DNA binding	IEP	Predicted GO
MF	GO:0003678	DNA helicase activity	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
CC	GO:0005634	nucleus	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0006270	DNA replication initiation	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006996	organelle organization	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
BP	GO:0010035	response to inorganic substance	IEP	Predicted GO
BP	GO:0010167	response to nitrate	IEP	Predicted GO
BP	GO:0010639	negative regulation of organelle organization	IEP	Predicted GO
BP	GO:0015698	inorganic anion transport	IEP	Predicted GO
BP	GO:0015706	nitrate transport	IEP	Predicted GO
BP	GO:0016043	cellular component organization	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
BP	GO:0032392	DNA geometric change	IEP	Predicted GO
BP	GO:0032508	DNA duplex unwinding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0033043	regulation of organelle organization	IEP	Predicted GO
BP	GO:0033044	regulation of chromosome organization	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
CC	GO:0042555	MCM complex	IEP	Predicted GO
BP	GO:0043086	negative regulation of catalytic activity	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
CC	GO:0043227	membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predicted GO
BP	GO:0043412	macromolecule modification	IEP	Predicted GO
BP	GO:0044092	negative regulation of molecular function	IEP	Predicted GO
BP	GO:0044238	primary metabolic process	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
BP	GO:0051095	regulation of helicase activity	IEP	Predicted GO
BP	GO:0051097	negative regulation of helicase activity	IEP	Predicted GO
BP	GO:0051128	regulation of cellular component organization	IEP	Predicted GO
BP	GO:0051129	negative regulation of cellular component organization	IEP	Predicted GO
BP	GO:0051276	chromosome organization	IEP	Predicted GO
BP	GO:0051336	regulation of hydrolase activity	IEP	Predicted GO
BP	GO:0051346	negative regulation of hydrolase activity	IEP	Predicted GO
BP	GO:0071103	DNA conformation change	IEP	Predicted GO
BP	GO:0071704	organic substance metabolic process	IEP	Predicted GO
BP	GO:0071840	cellular component organization or biogenesis	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO
BP	GO:1901698	response to nitrogen compound	IEP	Predicted GO
BP	GO:1901700	response to oxygen-containing compound	IEP	Predicted GO
BP	GO:1905462	regulation of DNA duplex unwinding	IEP	Predicted GO
BP	GO:1905463	negative regulation of DNA duplex unwinding	IEP	Predicted GO
BP	GO:1905774	regulation of DNA helicase activity	IEP	Predicted GO
BP	GO:1905775	negative regulation of DNA helicase activity	IEP	Predicted GO
BP	GO:2001251	negative regulation of chromosome organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001153	Barwin_dom	33	151

External Links

No external refs found!

Sobic.005G169400.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation