1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.005G179300.1

Sobic.005G179300.1


Description : Unknown function


Gene families : OG_42_0004906 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004906_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G179300.1
Cluster HCAA Clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
At5g64840 No alias GCN5 [Source:UniProtKB/TrEMBL;Acc:A0A178UAA3] 0.03 Orthogroups_2024-Update
Cre08.g372250 No alias general control non-repressible 5 0.01 Orthogroups_2024-Update
GRMZM2G105570 No alias general control non-repressible 5 0.05 Orthogroups_2024-Update
Glyma.06G146900 No alias general control non-repressible 5 0.05 Orthogroups_2024-Update
Kfl00486_0090 kfl00486_0090_v1.1 (at5g64840 : 727.0) member of GCN subfamily; general... 0.02 Orthogroups_2024-Update
LOC_Os11g39020 No alias ABC transporter, ATP-binding protein, putative, expressed 0.05 Orthogroups_2024-Update
MA_10437027g0010 No alias (at5g64840 : 749.0) member of GCN subfamily; general... 0.03 Orthogroups_2024-Update
Pp1s125_77V6 No alias abc transporter family protein 0.02 Orthogroups_2024-Update
Pp1s495_14V6 No alias abc transporter family protein 0.03 Orthogroups_2024-Update
Seita.8G181700.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Sopen04g023150 No alias ABC transporter 0.02 Orthogroups_2024-Update
evm.model.contig_2122.16 No alias (at5g09930 : 522.0) member of GCN subfamily; GENERAL... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001505 regulation of neurotransmitter levels IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006544 glycine metabolic process IEP Predicted GO
BP GO:0006546 glycine catabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009071 serine family amino acid catabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0042133 neurotransmitter metabolic process IEP Predicted GO
BP GO:0042135 neurotransmitter catabolic process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 124 299
IPR003439 ABC_transporter-like 452 583
IPR032781 ABC_tran_Xtn 338 425
No external refs found!