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At3g59260


Description : Putative pirin-like protein At3g59260 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX45]


Gene families : OG_42_0001449 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g59260
Cluster HCCA clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
Brara.E00339.1 No alias transcriptional co-regulator *(Pirin) 0.03 Orthogroups_2024-Update
GRMZM2G101116 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Solyc12g014590 No alias Pirin-like protein family (AHRD V3.3 *** A0A151SXI4_CAJCA) 0.03 Orthogroups_2024-Update
Sopen09g036130 No alias Pirin C-terminal cupin domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008778 Pirin_C_dom 154 260
IPR003829 Pirin_N_dom 21 101
No external refs found!