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  5. Sobic.005G186400.1

Sobic.005G186400.1


Description : phospholipase-A2 *(pPLA2-II))


Gene families : OG_42_0000167 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G186400.1
Cluster HCAA Clusters: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
231548 No alias phospholipase A 2A 0.02 Orthogroups_2024-Update
At4g37070 No alias Patatin [Source:UniProtKB/TrEMBL;Acc:A0A178UVZ8] 0.02 Orthogroups_2024-Update
Bradi4g13670 No alias phospholipase A 2A 0.04 Orthogroups_2024-Update
GRMZM2G034271 No alias phospholipase A 2A 0.04 Orthogroups_2024-Update
LOC_Os11g39990 No alias patatin, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00019323-RA No alias (at2g26560 : 273.0) Encodes a lipid acyl hydrolase with... 0.02 Orthogroups_2024-Update
PSME_00032492-RA No alias (at2g26560 : 257.0) Encodes a lipid acyl hydrolase with... 0.02 Orthogroups_2024-Update
PSME_00041671-RA No alias (at2g26560 : 227.0) Encodes a lipid acyl hydrolase with... 0.02 Orthogroups_2024-Update
Potri.007G040300 No alias phospholipase A 2A 0.03 Orthogroups_2024-Update
Seita.6G184100.1 No alias phospholipase-A2 *(pPLA2-II)) 0.04 Orthogroups_2024-Update
Sobic.007G158500.1 No alias phospholipase-A2 *(pPLA2-II)) 0.04 Orthogroups_2024-Update
Sobic.007G158600.1 No alias phospholipase-A2 *(pPLA2-II)) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR002641 PNPLA_dom 28 238
No external refs found!