Sobic.005G193500.1


Description : SD-1 protein kinase & EC_2.7 transferase transferring phosphorus-containing group


Gene families : OG_42_0000348 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000348_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G193500.1
Cluster HCAA Clusters: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g59950 No alias receptor-like kinase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G413800 No alias S-locus lectin protein kinase family protein 0.04 Orthogroups_2024-Update
Potri.011G128700 No alias S-locus lectin protein kinase family protein 0.03 Orthogroups_2024-Update
Solyc07g063730 No alias Serine/threonine-protein kinase (AHRD V3.3 *** M1CC72_SOLTU) 0.03 Orthogroups_2024-Update
Solyc07g063780 No alias Serine/threonine-protein kinase (AHRD V3.3 *** M1BP20_SOLTU) 0.03 Orthogroups_2024-Update
Sopen10g002630 No alias D-mannose binding lectin 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
BP GO:0006468 protein phosphorylation IEA 16Dec
BP GO:0048544 recognition of pollen IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000858 S_locus_glycoprot_dom 222 333
IPR000719 Prot_kinase_dom 526 729
IPR001480 Bulb-type_lectin_dom 79 190
IPR003609 Pan_app 358 424
No external refs found!