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  5. Sobic.005G197400.1

Sobic.005G197400.1


Description : Unknown function


Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G197400.1
Cluster HCAA Clusters: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G030000 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Glyma.13G190800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Glyma.19G085600 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Glyma.19G138301 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
LOC_Os04g24700 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os10g04060 No alias powdery mildew resistance protein PM3b, putative, expressed 0.02 Orthogroups_2024-Update
Potri.003G200120 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.006G274300 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Seita.3G402500.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.8G234500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G161400.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Solyc08g076000 No alias NBS-LRR resistance protein (AHRD V3.3 *** B6E013_SOLBU) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006476 protein deacetylation IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 49 289
No external refs found!