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At3g59540


Description : 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O22860]


Gene families : OG_42_0001927 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g59540
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
270247 No alias Ribosomal L38e protein family 0.06 Orthogroups_2024-Update
Brara.C02203.1 No alias component *(eL38) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.D00205.1 No alias component *(eL38) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Cre07.g325746 No alias Ribosomal L38e protein family 0.04 Orthogroups_2024-Update
Glyma.08G100000 No alias Ribosomal L38e protein family 0.05 Orthogroups_2024-Update
Glyma.13G221500 No alias Ribosomal L38e protein family 0.03 Orthogroups_2024-Update
HORVU2Hr1G043220.1 No alias component *(eL38) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Kfl00433_0040 kfl00433_0040_v1.1 (at3g59540 : 122.0) Ribosomal L38e protein family;... 0.03 Orthogroups_2024-Update
LOC_Os11g24610 No alias 60S ribosomal protein L38, putative, expressed 0.02 Orthogroups_2024-Update
MA_20588g0010 No alias (at3g59540 : 129.0) Ribosomal L38e protein family;... 0.04 Orthogroups_2024-Update
PSME_00035421-RA No alias (at3g59540 : 127.0) Ribosomal L38e protein family;... 0.03 Orthogroups_2024-Update
Pp1s227_122V6 No alias 60s ribosomal protein l38 0.03 Orthogroups_2024-Update
Pp1s288_10V6 No alias 60s ribosomal protein l38 0.04 Orthogroups_2024-Update
Seita.2G333600.1 No alias component *(eL38) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Seita.2G344700.1 No alias component *(eL38) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.007G184600.2 No alias component *(eL38) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Solyc11g008510 No alias 60S ribosomal protein L38 (AHRD V3.3 *** RL38_SOLLC) 0.02 Orthogroups_2024-Update
evm.model.tig00021719.6 No alias (at3g59540 : 110.0) Ribosomal L38e protein family;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0017053 transcriptional repressor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002675 Ribosomal_L38e 2 68
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