1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.005G217900.1

Sobic.005G217900.1


Description : Unknown function


Gene families : OG_42_0000240 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000240_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G217900.1
Cluster HCAA Clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
103145 No alias Protein of Unknown Function (DUF239) 0.03 Orthogroups_2024-Update
A4A49_41394 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi2g40687 No alias Protein of Unknown Function (DUF239) 0.02 Orthogroups_2024-Update
Brara.E00409.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J00689.1 No alias regulatory protein *(LOTR) involved in Casparian strip formation 0.03 Orthogroups_2024-Update
GRMZM2G151319 No alias Protein of Unknown Function (DUF239) 0.03 Orthogroups_2024-Update
GRMZM2G162928 No alias Protein of Unknown Function (DUF239) 0.02 Orthogroups_2024-Update
GRMZM2G457287 No alias Protein of Unknown Function (DUF239) 0.03 Orthogroups_2024-Update
Glyma.14G213700 No alias Protein of Unknown Function (DUF239) 0.05 Orthogroups_2024-Update
Glyma.17G087100 No alias Protein of Unknown Function (DUF239) 0.02 Orthogroups_2024-Update
HORVU7Hr1G108240.10 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g07570 No alias carboxyl-terminal proteinase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g37000 No alias carboxyl-terminal peptidase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g59240 No alias carboxyl-terminal peptidase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g07764 No alias carboxyl-terminal proteinase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g28000 No alias carboxyl-terminal peptidase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g10530 No alias carboxyl-terminal peptidase, putative, expressed 0.05 Orthogroups_2024-Update
PSME_00039667-RA No alias (at1g10750 : 528.0) Protein of Unknown Function... 0.03 Orthogroups_2024-Update
Seita.3G101000.1 No alias regulatory protein *(LOTR) involved in Casparian strip formation 0.03 Orthogroups_2024-Update
Seita.8G136900.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.8G204100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G217766.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g033120 No alias Domain of unknown function (DUF239) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004314 Neprosin 232 444
IPR025521 Neprosin_propep 88 205
No external refs found!