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  5. Sobic.005G220000.1

Sobic.005G220000.1


Description : Unknown function


Gene families : OG_42_0000814 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G220000.1
Cluster HCAA Clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
At3g06480 No alias DEAD-box ATP-dependent RNA helicase 40... 0.02 Orthogroups_2024-Update
Bradi2g05990 No alias DEA(D/H)-box RNA helicase family protein 0.01 Orthogroups_2024-Update
Brara.B00559.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G139400.1 No alias regulatory RNA helicase *(RH20/RH30) of virus replication 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 820 928
IPR011545 DEAD/DEAH_box_helicase_dom 613 783
No external refs found!