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  5. Sobic.005G220200.1

Sobic.005G220200.1


Description : Unknown function


Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G220200.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
A4A49_15893 No alias putative disease resistance protein rga3 0.02 Orthogroups_2024-Update
Glyma.09G020600 No alias NB-ARC domain-containing disease resistance protein 0.05 Orthogroups_2024-Update
HORVU1Hr1G068200.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G126380.4 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g25720 No alias disease resistance protein RGA4, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g45690 No alias symbiosis-related disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.3G402500.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.6G017500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.008G101100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G101500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G180900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g088060 No alias Nbs-lrr resistance protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc11g071410 No alias Disease resistance protein (AHRD V3.3 *-* B3IYJ6_CAPCH) 0.03 Orthogroups_2024-Update
Sopen11g019490 No alias NB-ARC domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
CC GO:0045273 respiratory chain complex II IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 171 388
No external refs found!