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  5. Sobic.005G224400.1

Sobic.005G224400.1


Description : EC_2.1 transferase transferring one-carbon group


Gene families : OG_42_0000016 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G224400.1
Cluster HCAA Clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Bradi2g02380 No alias O-methyltransferase 1 0.04 Orthogroups_2024-Update
GRMZM2G085924 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Glyma.06G286700 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Glyma.09G281800 No alias O-methyltransferase 1 0.04 Orthogroups_2024-Update
Glyma.10G176500 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Glyma.20G176100 No alias O-methyltransferase 1 0.04 Orthogroups_2024-Update
MA_10432987g0020 No alias (p28002|comt1_medsa : 228.0) Caffeic acid... 0.04 Orthogroups_2024-Update
MA_749919g0010 No alias (p28002|comt1_medsa : 127.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00009784-RA No alias (p28002|comt1_medsa : 427.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00021108-RA No alias (p28002|comt1_medsa : 130.0) Caffeic acid... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA 16Dec
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR001077 O_MeTrfase_2 141 354
IPR012967 Plant_MeTrfase_dimerisation 33 81
No external refs found!