Sobic.005G229000.2

Description : RNA splicing factor *(SCL28/30/33)

Gene families : OG_42_0000852 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000852_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.005G229000.2
Cluster	HCAA Clusters: Cluster_171

Target	Alias	Description	ECC score	Gene Family Method
Cre01.g038650	No alias	SC35-like splicing factor 30A	0.01	Orthogroups_2024-Update
Glyma.14G188200	No alias	SC35-like splicing factor 30A	0.03	Orthogroups_2024-Update
HORVU4Hr1G045510.3	No alias	RNA splicing factor *(SCL28/30/33)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004649	poly(ADP-ribose) glycohydrolase activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
BP	GO:0006282	regulation of DNA repair	IEP	Predicted GO
MF	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEP	Predicted GO
MF	GO:0015020	glucuronosyltransferase activity	IEP	Predicted GO
BP	GO:0048583	regulation of response to stimulus	IEP	Predicted GO
BP	GO:0051052	regulation of DNA metabolic process	IEP	Predicted GO
BP	GO:0080134	regulation of response to stress	IEP	Predicted GO
BP	GO:0080135	regulation of cellular response to stress	IEP	Predicted GO
BP	GO:2001020	regulation of response to DNA damage stimulus	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	42	112

External Links

No external refs found!