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  5. Sobic.005G230000.1

Sobic.005G230000.1


Description : GRAS-type transcription factor


Gene families : OG_42_0000237 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000237_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G230000.1
Cluster HCAA Clusters: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
106490 No alias GRAS family transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G073805 No alias GRAS family transcription factor 0.05 Orthogroups_2024-Update
GRMZM2G163427 No alias GRAS family transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G179325 No alias GRAS family transcription factor 0.03 Orthogroups_2024-Update
Glyma.12G062100 No alias SCARECROW-like 14 0.03 Orthogroups_2024-Update
PSME_00034111-RA No alias (at2g37650 : 320.0) GRAS family transcription factor;... 0.03 Orthogroups_2024-Update
Pp1s84_299V6 No alias F12A12.120; scarecrow transcription factor family... 0.02 Orthogroups_2024-Update
Sobic.001G174300.1 No alias GRAS-type transcription factor 0.03 Orthogroups_2024-Update
Sopen04g005810 No alias GRAS domain family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005202 TF_GRAS 321 701
No external refs found!