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  5. Sobic.005G230200.1

Sobic.005G230200.1


Description : GRAS-type transcription factor


Gene families : OG_42_0000237 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000237_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G230200.1
Cluster HCAA Clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
A4A49_07109 No alias scarecrow-like protein 30 0.02 Orthogroups_2024-Update
A4A49_41610 No alias scarecrow-like protein 14 0.03 Orthogroups_2024-Update
Bradi2g52227 No alias GRAS family transcription factor 0.04 Orthogroups_2024-Update
Bradi4g09196 No alias SCARECROW-like 14 0.05 Orthogroups_2024-Update
Bradi4g09239 No alias GRAS family transcription factor 0.03 Orthogroups_2024-Update
Brara.C01893.1 No alias GRAS-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F01804.1 No alias GRAS-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G028608 No alias GRAS family transcription factor 0.05 Orthogroups_2024-Update
GRMZM2G163427 No alias GRAS family transcription factor 0.04 Orthogroups_2024-Update
Glyma.11G138502 No alias SCARECROW-like 14 0.04 Orthogroups_2024-Update
Glyma.15G036900 No alias SCARECROW-like 14 0.02 Orthogroups_2024-Update
LOC_Os04g50060 No alias GRAS family transcription factor domain containing... 0.03 Orthogroups_2024-Update
Potri.001G242000 No alias SCARECROW-like 14 0.05 Orthogroups_2024-Update
Seita.8G250000.1 No alias GRAS-type transcription factor 0.05 Orthogroups_2024-Update
Sobic.005G229400.1 No alias GRAS-type transcription factor 0.05 Orthogroups_2024-Update
Sobic.005G230100.1 No alias GRAS-type transcription factor 0.05 Orthogroups_2024-Update
Sopen01g043700 No alias GRAS domain family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0017003 protein-heme linkage IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005202 TF_GRAS 335 712
No external refs found!