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  5. Sobic.005G230500.2

Sobic.005G230500.2


Description : GRAS-type transcription factor


Gene families : OG_42_0009053 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009053_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G230500.2
Cluster HCAA Clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Sobic.005G209000.1 No alias GRAS-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR005202 TF_GRAS 154 414
IPR005202 TF_GRAS 420 486
No external refs found!