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  5. Sobic.005G231300.1

Sobic.005G231300.1


Description : Unknown function


Gene families : OG_42_0000045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G231300.1
Cluster HCAA Clusters: Cluster_298

Target Alias Description ECC score Gene Family Method Actions
422821 No alias Pathogenesis-related thaumatin superfamily protein 0.01 Orthogroups_2024-Update
At4g11650 No alias OSM34 [Source:UniProtKB/TrEMBL;Acc:A0A178V0T2] 0.01 Orthogroups_2024-Update
GRMZM2G100747 No alias Pathogenesis-related thaumatin superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G258600 No alias THAUMATIN-LIKE PROTEIN 1 0.02 Orthogroups_2024-Update
MA_6505g0010 No alias (p33679|zeam_maize : 282.0) Zeamatin precursor - Zea... 0.02 Orthogroups_2024-Update
Potri.005G112700 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Sobic.006G015900.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001938 Thaumatin 49 263
No external refs found!