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  5. Sobic.005G231400.2

Sobic.005G231400.2


Description : regulatory protein *(CYCD) of cell cycle


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G231400.2
Cluster HCAA Clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
A4A49_04871 No alias cyclin-d3-2 0.03 Orthogroups_2024-Update
At3g50070 No alias CYCD3 [Source:UniProtKB/TrEMBL;Acc:A0A178VE15] 0.03 Orthogroups_2024-Update
Brara.I00818.1 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
Cre09.g414416 No alias Cyclin family protein 0.01 Orthogroups_2024-Update
GRMZM2G007130 No alias cyclin d5;1 0.02 Orthogroups_2024-Update
Glyma.01G035600 No alias CYCLIN D1;1 0.01 Orthogroups_2024-Update
HORVU4Hr1G069970.1 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
MA_172842g0010 No alias (at3g50070 : 166.0) Encode CYCD3;3, a CYCD3 D-type... 0.03 Orthogroups_2024-Update
MA_17738g0010 No alias (at3g50070 : 241.0) Encode CYCD3;3, a CYCD3 D-type... 0.03 Orthogroups_2024-Update
MA_94639g0010 No alias (at1g70210 : 160.0) Encodes a D-type cyclin that... 0.02 Orthogroups_2024-Update
PSME_00001479-RA No alias (at4g34160 : 239.0) encodes a cyclin D-type protein... 0.02 Orthogroups_2024-Update
PSME_00003592-RA No alias (at4g34160 : 230.0) encodes a cyclin D-type protein... 0.03 Orthogroups_2024-Update
PSME_00024235-RA No alias (at4g34160 : 108.0) encodes a cyclin D-type protein... 0.01 Orthogroups_2024-Update
Seita.3G370300.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Seita.4G104200.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Sopen01g010480 No alias Cyclin, N-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 226 325
IPR006671 Cyclin_N 121 223
No external refs found!