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  5. Sobic.005G231700.2

Sobic.005G231700.2


Description : C2H2 subclass ZFP transcription factor


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G231700.2
Cluster HCAA Clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
430201 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
At1g13400 No alias Zinc finger protein JAGGED-like... 0.06 Orthogroups_2024-Update
Bradi1g58540 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
Bradi1g58572 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Brara.B00008.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Brara.J02609.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G133552 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
Glyma.10G272300 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G186000 No alias zinc-finger protein 10 0.04 Orthogroups_2024-Update
Glyma.20G117800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os02g01090 No alias ZOS2-01 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
Potri.008G163900 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Seita.2G305800.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G209800.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!