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  5. Sobic.006G000100.1

Sobic.006G000100.1


Description : aconitase *(ACO) & aconitase & EC_4.2 carbon-oxygen lyase


Gene families : OG_42_0001446 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G000100.1
Cluster HCAA Clusters: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
At4g26970 No alias Aconitate hydratase [Source:UniProtKB/TrEMBL;Acc:A0A178UVE5] 0.02 Orthogroups_2024-Update
Brara.C04047.1 No alias aconitase *(ACO) & aconitase 0.02 Orthogroups_2024-Update
Glyma.06G305700 No alias aconitase 3 0.03 Orthogroups_2024-Update
Glyma.13G308700 No alias aconitase 3 0.02 Orthogroups_2024-Update
Mp8g07060.1 No alias aconitase. aconitase 0.02 Orthogroups_2024-Update
Pp1s66_291V6 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001030 Acoase/IPM_deHydtase_lsu_aba 69 572
IPR000573 AconitaseA/IPMdHydase_ssu_swvl 701 829
No external refs found!