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  5. Sobic.006G009500.1

Sobic.006G009500.1


Description : Unknown function


Gene families : OG_42_0000675 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000675_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G009500.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G028046 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
GRMZM2G172605 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G077490.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Potri.001G415600 No alias zinc finger protein-related 0.02 Orthogroups_2024-Update
Sobic.006G278400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc04g081370 No alias C2H2-like zinc finger protein (AHRD V3.3 *** AT1G75710.1) 0.02 Orthogroups_2024-Update
Sopen06g033200 No alias hypothetical protein 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0004725 protein tyrosine phosphatase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!