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  5. Sobic.006G015800.1

Sobic.006G015800.1


Description : starch-debranching pullulan-6-glucanohydrolase *(PU1)


Gene families : OG_42_0007113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G015800.1
Cluster HCAA Clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
evm.model.contig_2306.1 No alias (at5g04360 : 153.0) Encodes an enzyme thought to be... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 208 292
IPR024561 Pullul_strch_C 792 961
No external refs found!