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  5. Sobic.006G019300.1

Sobic.006G019300.1


Description : component *(HOS15) of HDA9-PWR deacetylation complex


Gene families : OG_42_0002828 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002828_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G019300.1
Cluster HCAA Clusters: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Cre12.g527500 No alias WD-40 repeat family protein 0.03 Orthogroups_2024-Update
Mp6g00250.1 No alias component HOS15 of HDA9-PWR deacetylation complex 0.03 Orthogroups_2024-Update
Sopen04g031910 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 302 341
IPR001680 WD40_repeat 349 382
IPR001680 WD40_repeat 470 515
IPR001680 WD40_repeat 520 558
IPR001680 WD40_repeat 428 465
IPR001680 WD40_repeat 247 281
IPR006594 LisH 49 74
No external refs found!